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View Structure Prediction Details

Protein: NDT1_ARATH
Organism: Arabidopsis thaliana
Length: 312 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|46249805 - gi|46249805|gb|AAH68561.1| Solute carrier family 25 (mitochondrial carrier; phosphate carrier), memb...
295.0 [0..4] [300..188]

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Predicted Domain #1
Region A:
Residues: [1-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANSHPPNS KNVLCNAAAG AAAGVVAATF VCPLDVIKTR FQVHGLPKLG DANIKGSLIV  60
   61 GSLEQIFKRE GMRGLYRGLS PTVMALLSNW AIYFTMYDQL KSFLCSNDHK LSVGANVLAA 120
  121 SGAGAATTIA TNPLWVVKTR LQTQGMRVGI VPYKSTFSAL RRIAYEEGIR GLYSGLVPAL 180
  181 AGISHVAIQF PTYEMIKVYL AKKGDKSVDN LNARDVAVAS SIAKIFASTL TYPHEVVRAR 240
  241 LQEQGHHSEK RYSGVRDCIK KVFEKDGFPG FYRGCATNLL RTTPAAVITF TSFEMVHRFL 300
  301 VTHIPSEQSS IL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.0
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle