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View Structure Prediction Details

Protein: CIPK2_ARATH
Organism: Arabidopsis thaliana
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIPK2_ARATH.

Description E-value Query
Range
Subject
Range
gi|9280636 - gi|9280636|gb|AAF86506.1|AF286050_1 CBL-interacting protein kinase 2 [Arabidopsis thaliana]
405.0 [0..1] [456..1]

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Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKPSVLTE RYEVGRLLGQ GTFAKVYFGR SNHTNESVAI KMIDKDKVMR VGLSQQIKRE  60
   61 ISVMRIAKHP NVVELYEVMA TKSRIYFVIE YCKGGELFNK VAKGKLKEDV AWKYFYQLIS 120
  121 AVDFCHSRGV YHRDIKPENL LLDDNDNLKV SDFGLSALAD CKRQDGLLHT TCGTPAYVAP 180
  181 EVINRKGYEG TKADIWSCGV VLFVLLAGYL PFHDTNLMEM YRKIGKADFK CPSWFAPEVK 240
  241 RLLCKMLDPN HETRITIAKI KESSWFRKGL HLKQKKMEKM EKQQVREATN PMEAGGSGQN 300
  301 ENGENHEPPR LATL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.221849
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [315-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAFDIIALST GFGLAGLFGD VYDKRESRFA SQKPASEIIS KLVEVAKCLK LKIRKQGAGL  60
   61 FKLERVKEGK NGILTMDAEI FQVTPTFHLV EVKKCNGDTM EYQKLVEEDL RPALADIVWV 120
  121 WQGEKEKEEQ LLQDEQGEQE PS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 2ehbD
Description: No description for 2ehbD was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle