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View Structure Prediction Details

Protein: LEA3_ARATH
Organism: Arabidopsis thaliana
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEA3_ARATH.

Description E-value Query
Range
Subject
Range
LEA32_ARATH - Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana GN=ECP31 PE=2 SV=1
191.0 [0..21] [182..88]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQHQHSPQR PRDQDNTRPH DQYGIVFSVS GDDVARKQGD SFSQPDPTVA TMGSVDTVTI  60
   61 GEALEATALS LGDKPVDRRD AAAIQAAETR ATGESKGRPG GLAVAAQAAA TTNEQTV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.119186
Match: PF04927.3
Description: No description for PF04927.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [118-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEEDKVNIAD ILTDAAERLP GDKVVTSEDA EAVVGAELRS SSEMKTTPGG VADSMSAGAR  60
   61 LNQQL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.522879
Match: PF04927.3
Description: No description for PF04927.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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