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View Structure Prediction Details

Protein: gi|7576190, gi|1...
Organism: Arabidopsis thaliana
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7576190, gi|1....

Description E-value Query
Range
Subject
Range
gi|34013886 - gb|AAQ56111.1| pollen specific glycine-rich protein GRP17 [Boechera drummondii]
gi|34013886 - gi|34013886|gb|AAQ56111.1| pollen specific glycine-rich protein GRP17 [Boechera drummondii]
150.0 [0..1] [126..51]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSFLIFLLE AFQVVIATVV SIVFLVFAGL TLVGSATALT ITTPLFIIFS PILVPATIAT  60
   61 AVITTGFTTG GALGAMAVAL IRRRMGAKPT AEGT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.823909
Match: PF01277.8
Description: No description for PF01277.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSAQPLLKLP VYGGYGGFWG GKKFSGTFGN KPGGGNPFGD ISKWLGPGAA GGGAPGGLGG  60
   61 GGNPFGNISK WFGPGAAGGD ASAAGGAPAA EAAPAAGAAP AAGAAPAAGA APAAGAAPAA 120
  121 GAAPAAGGST PPTW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle