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View Structure Prediction Details

Protein: DTX9_ARATH
Organism: Arabidopsis thaliana
Length: 482 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX9_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
330.0 [0..7] [475..624]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSIETPLL LNTKQSQDED KEKIRWEKMK KVASMAAPMV AVNMSQYLLQ ATSTMIVGHR  60
   61 SELALAGIAL GSSFANVTGF GVLFGLSGSL ETLCGQAYGA KQYHKLGSYT FTSIVFLLII 120
  121 SVPISILWMF MNQILLLLHQ DPQIAELAGV YCLWLVPALF GYSVLESLVR YFQSQSLIYP 180
  181 MVLSSLAALS FHVPLCWLMV HKFDFGAKGA AASIGISYWL NAVFLWVYMK RSSRCVETRI 240
  241 YM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.508638
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [243-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKDVFVHTNI FFQFAIPSAM MCCLEWLAFE VITLLSGLLP NSKLETSVIS ICLTTSSLHY  60
   61 NLVNGIGDAA STNVANELGA GNPRGARDSA AAAIIIAAVE SVIVSSSLFL SRSVWPYAYS 120
  121 NVEEVISYVT DITPILCISI LMDSFLTVLS GIVRGTGWQK IGAYVNITSY YVIGIPVGLL 180
  181 LCFHLHFNGK GLWAGLVTGS TLQTLILFLV IGFTNWSKEA IKARERIGDE KVWRHDSLLN 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.251812
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle