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View Structure Prediction Details

Protein: AP2M_ARATH
Organism: Arabidopsis thaliana
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP2M_ARATH.

Description E-value Query
Range
Subject
Range
gi|73986108 - gi|73986108|ref|XP_866004.1| PREDICTED: similar to adaptor-related protein complex 1, mu 1 subunit i...
453.0 [0..3] [437..1]

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Predicted Domain #1
Region A:
Residues: [1-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVAASAIYF LNLRGDVLIN RTYRDDVGGN MVDAFRTHIM QTKELGNCPV RQIGGCSFVY  60
   61 MRISNVYIVI VVSSNANVAC GFKFVVEAVA LFKSYFGGAF DEDAIRNNFV LIYELLDEIM 120
  121 DFGYPQNLSP EILKLYITQE GVRSPFSSKP KDKPVPNATL QVTGAVGWRR EGLAYKKNEV 180
  181 FLDIVESVNL LMSSKGNVLR CDVTGKVLMK CFLSGMPDLK LGLNDKIGLE KESEMKSRPA 240
  241 KSGKTIELDD VTFHQCVNLT RFNSEKTVSF VPPDGEFELM KYRITEGVNL PFRVLPTIKE 300
  301 LGRTRMEVNV KVKSVFGAKM FALGVVVKIP VPKQTAKTNF QVTTGRAKYN PSIDCLVWKI 360
  361 RKFPGQTEST LSAEIELIST MGEKKSWTRP PIQMEFQVPM FTASGLRVRF LKVWEKSGYN 420
  421 TVEWVRYITK AGSYEIRC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 2bp5M
Description: MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH NON-CANONICAL INTERNALIZATION PEPTIDE VEDYEQGLSG
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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