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View Structure Prediction Details

Protein: AXR4_ARATH
Organism: Arabidopsis thaliana
Length: 473 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AXR4_ARATH.

Description E-value Query
Range
Subject
Range
gi|15983468 - gi|15983468|gb|AAL11602.1|AF424608_1 At1g54990/F14C21_5 [Arabidopsis thaliana]
892.0 [0..33] [473..1]

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Predicted Domain #1
Region A:
Residues: [1-473]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIITEEEED PKTLNPPKNK PKDSDFTKSE STMKNPKPQS QNPFPFWFYF TVVVSLATII  60
   61 FISLSLFSSQ NDPRSWFLSL PPALRQHYSN GRTIKVQVNS NESPIEVFVA ESGSIHTETV 120
  121 VIVHGLGLSS FAFKEMIQSL GSKGIHSVAI DLPGNGFSDK SMVVIGGDRE IGFVARVKEV 180
  181 YGLIQEKGVF WAFDQMIETG DLPYEEIIKL QNSKRRSFKA IELGSEETAR VLGQVIDTLG 240
  241 LAPVHLVLHD SALGLASNWV SENWQSVRSV TLIDSSISPA LPLWVLNVPG IREILLAFSF 300
  301 GFEKLVSFRC SKEMTLSDID AHRILLKGRN GREAVVASLN KLNHSFDIAQ WGNSDGINGI 360
  361 PMQVIWSSEA SKEWSDEGQR VAKALPKAKF VTHSGSRWPQ ESKSGELADY ISEFVSLLPK 420
  421 SIRRVAEEPI PEEVQKVLEE AKAGDDHDHH HGHGHAHAGY SDAYGLGEEW TTT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.03
Match: 1cqzA
Description: Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.768312194494454 bayes_pls_golite062009
hydrolase activity 0.305773042344667 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle