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View Structure Prediction Details

Protein: SFC1_ARATH
Organism: Arabidopsis thaliana
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SFC1_ARATH.

Description E-value Query
Range
Subject
Range
gi|109012617 - gi|109012617|ref|XP_001083681.1| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 ...
300.0 [0..6] [299..168]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV  60
   61 RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS ETGKVSNRGR FLSGFGAGVL 120
  121 EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG 180
  181 TNQAVMFTAK NAFDILLWNK HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA 240
  241 QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE 300
  301 MRYLRNAPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.0
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle