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View Structure Prediction Details

Protein: THIM_ARATH
Organism: Arabidopsis thaliana
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THIM_ARATH.

Description E-value Query
Range
Subject
Range
gi|28211403, gi|... - gi|28211403|ref|NP_782347.1| hydroxymethylpyrimidine kinase [Clostridium tetani E88], gi|28203844|gb...
200.0 [0..1] [264..11]

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Predicted Domain #1
Region A:
Residues: [1-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESKSEQNEW SSGVWAHLTA VRQQSPLVQC ITNFVSMDLV ANTLLSAGAS PAMVHSVVEI  60
   61 PDFTPHIHAL CVNVGTLTPD WLPSMKAAAE LASQLRKPWV LDPAAVSCSG FRLKACLELI 120
  121 ELKPTVIKGN GSEIIALSSA SRGQTKGADS SHESTDAIEA AKSLAMSSGA VVAVSGAVDI 180
  181 VTDGKQVIGV HNGTKMMQQI TATGCSLAGL IVAFLAIDSS RVLEATVSAM AVFGIAGELG 240
  241 EAMANGPASL RMHLIDCLYG LDETTVLKRV NVTRLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.09691
Match: 1v8aA
Description: Structure of Hydroxyethylthiazole kinase protein from pyrococcus horikoshii OT3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle