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View Structure Prediction Details

Protein: gi|15221423, gi|...
Organism: Arabidopsis thaliana
Length: 987 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|15221423, gi|....

Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSLYDEFG NYVGPEIESD RDSDDEVEDE DLQDKHLEEN GSDGEQGPGG SNGWITTIND  60
   61 VEMENQIVLP EDKKYYPTAE EVYGEDVETL VMDEDEQPLE QPIIKPVRDI RFEVGVKDQA 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.154902
Match: 2hjgA
Description: No description for 2hjgA was found.

Predicted Domain #2
Region A:
Residues: [121-987]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TYVSTQFLIG LMSNPALVRN VALVGHLQHG KTVFMDMLVE QTHHMSTFNA KNEKHMKYTD  60
   61 TRVDEQERNI SIKAVPMSLV LEDSRSKSYL CNIMDTPGHV NFSDEMTASL RLADGAVLIV 120
  121 DAAEGVMVNT ERAIRHAIQD HLPIVVVINK VDRLITELKL PPRDAYYKLR HTIEVINNHI 180
  181 SAASTTAGDL PLIDPAAGNV CFASGTAGWS FTLQSFAKMY AKLHGVAMDV DKFASRLWGD 240
  241 VYYHSDTRVF KRSPPVGGGE RAFVQFILEP LYKIYSQVIG EHKKSVETTL AELGVTLSNS 300
  301 AYKLNVRPLL RLACSSVFGS ASGFTDMLVK HIPSPREAAA RKVDHSYTGT KDSPIYESMV 360
  361 ECDPSGPLMV NVTKLYPKSD TSVFDVFGRV YSGRLQTGQS VRVLGEGYSP EDEEDMTIKE 420
  421 VTKLWIYQAR YRIPVSSAPP GSWVLIEGVD ASIMKTATLC NASYDEDVYI FRALQFNTLP 480
  481 VVKTATEPLN PSELPKMVEG LRKISKSYPL AITKVEESGE HTILGTGELY LDSIMKDLRE 540
  541 LYSEVEVKVA DPVVSFCETV VESSSMKCFA ETPNKKNKIT MIAEPLDRGL AEDIENGVVS 600
  601 IDWNRKQLGD FFRTKYDWDL LAARSIWAFG PDKQGPNILL DDTLPTEVDR NLMMAVKDSI 660
  661 VQGFQWGARE GPLCDEPIRN VKFKIVDARI APEPLHRGSG QMIPTARRVA YSAFLMATPR 720
  721 LMEPVYYVEI QTPIDCVTAI YTVLSRRRGH VTSDVPQPGT PAYIVKAFLP VIESFGFETD 780
  781 LRYHTQGQAF CLSVFDHWAI VPGDPLDKAI QLRPLEPAPI QHLAREFMVK TRRRKGMSED 840
  841 VSGNKFFDEA MMVELAQQTG DLHLQMI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1n0uA
Description: Elongation factor 2 (eEF-2), domain II; Elongation factor 2 (eEF-2), N-terminal (G) domain; Elongation factor 2 (eEF-2), domain IV; Elongation factor 2 (eEF-2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle