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View Structure Prediction Details

Protein: CAMK8_ARATH
Organism: Arabidopsis thaliana
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAMK8_ARATH.

Description E-value Query
Range
Subject
Range
CAMK2_ARATH - CDPK-related kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=1 SV=1
442.0 [0..1] [606..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGCTSKPST SSGRPNPFAP GNDYPQIDDF APDHPGKSPI PTPSAAKASP FFPFYTPSPA  60
   61 RHRRNKSRDV GGGGESKSLT STPLRQLRRA FHPPSPAKHI RAALRRRKGK KEAALSGVTQ 120
  121 LTTEVPQREE EEEVGLDKRF GF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.66
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [143-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKEFHSRVEL GEEIGRGHFG YTCSAKFKKG ELKGQVVAVK IIPKSKMTTA IAIEDVRREV  60
   61 KILQALSGHK NLVQFYDAFE DNANVYIAME LCEGGELLDR ILARGGKYSE NDAKPVIIQI 120
  121 LNVVAFCHFQ GVVHRDLKPE NFLYTSKEEN SQLKAIDFGL SDFVRPDERL NDIVGSAYYV 180
  181 APEVLHRSYT TEADVWSIGV IAYILLCGSR PFWARTESGI FRAVLKADPS FDEPPWPFLS 240
  241 SDAKDFVKRL LFKDPRRRMS ASQALMHPWI RAYNTDMNIP FDILIFRQM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 2jc6A
Description: No description for 2jc6A was found.

Predicted Domain #3
Region A:
Residues: [432-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAYLRSSSLR KAALRALSKT LIKDEILYLK TQFSLLAPNK DGLITMDTIR MALASNATEA  60
   61 MKESRIPEFL ALLNGLQYRG MDFEEFCAAA INVHQHESLD CWEQSIRHAY ELFDKNGNRA 120
  121 IVIEELASEL GVGPSIPVHS VLHDWIRHTD GKLSFFGFVK LLHGVSVRAS GKTTR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.045757
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle