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View Structure Prediction Details

Protein: DTX36_ARATH
Organism: Arabidopsis thaliana
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX36_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
334.0 [0..28] [503..623]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP  60
   61 AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF TLGLMLGMGS AVETLCGQAH 120
  121 GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM 180
  181 IFAYAVNFPI QKFLQSQSIV TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW 240
  241 WIIVLAQIIY IKISPRCRR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 43.244125
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [260-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TWDGFSWKAF DGLWDFFQLS AASAVMLCLE SWYSQILVLL AGLLKDPELA LDSLAICMSI  60
   61 SAMSFMVSVG FNAAASVRVS NELGAGNPRS AAFSTAVTTG VSFLLSLFEA IVILSWRHVI 120
  121 SYIFTDSPAV AEAVAELSPF LAITIVLNGV QPVLSGVAVG CGWQAYVAYV NIGCYYIVGI 180
  181 PIGYVLGFTY DMGARGIWTG MIGGTLMQTI ILVIVTFRTD WDKEVEKASR RLDQWEDTSP 240
  241 LLKQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 44.060481
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle