YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|225898669, gi...
Organism:	Arabidopsis thaliana
Length:	121 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|225898669, gi....

Description	E-value	Query Range	Subject Range
gi\|41323976 - gi\|41323976\|gb\|AAS00054.1\| CONSTANS-like protein CO1 [Populus deltoides]	141.0	[0..8]	[109..54]
gi\|30689668 - gi\|30689668\|ref\|NP_197875.2\| zinc finger (B-box type) family protein [Arabidopsis thaliana]	138.0	[0..26]	[115..45]
gi\|4557093 - gi\|4557093\|gb\|AAD22518.1\|AF001136_1 zinc finger protein [Pinus radiata]	136.0	[0..5]	[113..3]
gi\|111378451 - gi\|111378451\|gb\|ABH09237.1\| CONSTANS-like protein [Solanum tuberosum]	135.0	[0..28]	[111..10]

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Predicted Domain #1

Region A:
Residues: [1-121]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRGLNNEES RRSDGGGCRS LCTRPSVPVR CELCDGDASV FCEADSAFLC RKCDRWVHGA  60
   61 NFLAWRHVRR VLCTSCQKLT RRCLVGDHDF HVVLPSVTTV GETTVENRSE QDNHEVPFVF 120
  121 L

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Detection Method:	FFAS03
Confidence:	1.28
Match:	2dfyX
Description:	No description for 2dfyX was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits