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View Structure Prediction Details

Protein: PAP6_ARATH
Organism: Arabidopsis thaliana
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAP6_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592536 - gi|21592536|gb|AAM64485.1| unknown [Arabidopsis thaliana]
264.0 [0..1] [284..1]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV  60
   61 EVSIGGESDP PPSSSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGDDKQIAL LKLKLLSVVS GLNRGLVASV DDLERAEVAA KELETAGGPV DLTDDLDKLQ  60
   61 GKWRLLYSSA FSSRSLGGSR PGLPTGRLIP VTLGQVFQRI DVFSKDFDNI AEVELGAPWP 120
  121 FPPLEATATL AHKFELLGTC KIKITFEKTT VKTSGNLSQI PPFDIPRLPD SFRPSSNPGT 180
  181 GDFEVTYVDD TMRITRGDRG ELRVFVIA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 94.568636
Match: PF04755.3
Description: No description for PF04755.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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