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View Structure Prediction Details

Protein: ADS1_ARATH
Organism: Arabidopsis thaliana
Length: 305 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|47523282, gi|... - gi|47523282|ref|NP_998946.1| stearoyl-CoA desaturase [Sus scrofa], gi|40549310|gb|AAR87714.1| stearo...
362.0 [0..3] [301..42]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSASEKEE NNKKMAADKA EMGRKKRAMW ERKWKRLDIV KAFASLFVHF LCLLAPFNFT  60
   61 WPALRVALIV YTVGGLGITV SYHRNLAHRS FKVPKWLEYF FAYCGLLAIQ GDPIDWVSTH 120
  121 RYHHQFTDSD RDPHSPNEGF WFSHLLWLFD TGYLVEKCGR RTNVEDLKRQ WYYKFLQRTV 180
  181 LYHILTFGFL LYYFGGLSFL TWGMGIGVAM EHHVTCLINS LCHVWGSRTW KTNDTSRNVW 240
  241 WLSVFSFG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [249-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESWHNNHHAF ESSARQGLEW WQIDISWYIV RFLEIIGLAT DVKLPSESQR RRMAMVR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.638 N/A N/A a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.569 N/A N/A a.4.1 Homeodomain-like
View Download 0.531 N/A N/A a.47.2 t-snare proteins
View Download 0.494 N/A N/A a.118.8 TPR-like
View Download 0.369 N/A N/A i.1.1 Ribosome and ribosomal fragments


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle