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View Structure Prediction Details

Protein: gi|15241889, gi|...
Organism: Arabidopsis thaliana
Length: 386 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241889, gi|....

Description E-value Query
Range
Subject
Range
gi|21105757 - gi|21105757|gb|AAM34777.1|AF509877_1 nam-like protein 14 [Petunia x hybrida]
274.0 [0..52] [359..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSKCNLID SKLEEHHHLC GSKHCPGCGR MIQAATKPNW VGLPAGVKFD PTDQELIEHL  60
   61 EAKVKGKEEN KKWSSSHPLI DEFIPTIDGE DGICYTHPQK LPGVTRDGLS KHFFHKPSRA 120
  121 YTTGTRKRRK IIQTDHDSEL TGSSETRWHK TGKTRPVMIN GQQRGCKKIL VLYTNFGKNR 180
  181 RPEKTNWVMH QYHLGINEEE REGELVVSKI FYQTQPRQCV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.045757
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [221-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNTNWSDHHG SKDVIGIGVG DEISSVAATL QSLGSGDVVS RVNMHPHTRS FDEGTAEASK  60
   61 GRENQHVSGT CEEVHDGIIT SSMSSHHMIH DHHNQHHQIG DRREFHMSSS YPMTPTITSQ 120
  121 HESIFHVTST MPFQGSVVWF GIRRPNYGLY HSYVYRRRKF LTNLCI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle