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View Structure Prediction Details

Protein: ANTL2_ARATH
Organism: Arabidopsis thaliana
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANTL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|68373624 - gi|68373624|ref|XP_692242.1| PREDICTED: similar to Cationic amino acid transporter 3 (CAT-3) (Solute...
229.0 [0..22] [400..965]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFQNEASSS SYTLKIPPPA REDSPLLGKG PPLSSQFKTF ANVFIAVVGA GVLGLPYAFK  60
   61 RTGWLMGVLL LVSVSVLTHH CMMLLVYTRR KLDSFNAGIS KIGSFGDLGF AVCGSLGRIV 120
  121 VDLFIILSQA GFCVGYLIFI GTTLANLSDP ESPTSLRHQF TRLGSEFLGV SSKSLYIWGC 180
  181 FPFQLGLNSI KTLTHLAPLS IFADIVDLGA MAVVIVEDSM IILKQRPDVV AFGGMSLFLY 240
  241 GMGVAVYSFE GVGMVLPLES EMKDKDKFGK VLALGMGFIS LIYIAFGILG YLAFGEDTMD 300
  301 IITANLGAGL VSTVVQLGLC INLFFTFPLM MNPVFEIVER RFSRGMYSAW LRWVLVLAVT 360
  361 LVALFVPNFA DFLSLVGSST CCVLGFVLPA LFHLLVFKEE MGWLQWSSDT AIVVLGVVLA 420
  421 VSGTWSSLSE IFSVKV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.33
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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