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View Structure Prediction Details

Protein: gi|21553632, gi|...
Organism: Arabidopsis thaliana
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21553632, gi|....

Description E-value Query
Range
Subject
Range
gi|17065486, gi|... - gi|22329049|ref|NP_194864.2| selenium binding [Arabidopsis thaliana], gi|20148645|gb|AAM10213.1| unk...
195.0 [0..5] [183..7]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKKVDGEG KGKAIANTRM LRSMDRKTRS DTKRDGSSSK LMKIESPEKK KRKTTKAKNV  60
   61 GAAKKKVKKE EVAVKIEKEE EEDDDAAEKE EDDDSDKKKI VIEHCK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QCKSFKERAN EVKEGLEEAV PGIIVTVNPD KPRRGCFEIR EEGGETFISL LAMKRPFTPM  60
   61 KELNMEEVIA DIVEKIK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.32
Match: 2okaA
Description: No description for 2okaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle