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View Structure Prediction Details

Protein: EB1C_ARATH
Organism: Arabidopsis thaliana
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EB1C_ARATH.

Description E-value Query
Range
Subject
Range
gi|12751130 - gi|12751130|gb|AAK07556.1| EBF3-L [Homo sapiens]
415.0 [0..1] [280..3]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNIGMMDS AYFVGRSEIL AWINSTLQLN LSKVEEACSG AVHCQLMDSV HPGTVPMHKV  60
   61 NFDAKSEYEM IQNYKVLQDV FNKLKITKHI EVSKLVKGRP LDNLEFMQWM KKYCDSVNGG 120
  121 QHNYHALERR EASKGGKEAT KRAAATQQSG KSSSSSAPPR PSSSNGTRKH EPQSNNTGTH 180
  181 HSSTGNHHH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.522879
Match: 1wyoA
Description: Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [190-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSKPSAKQSK PVPAYDEKIT ELKLYIDSLE KERDFYFSKL RDVEILCQNP DTEHLPLVGS  60
   61 IKRILYAADG EDVGAAETQT LSPIAEGSEE RRNSVTESQK RKLIVNLDVD VAAITTLSPR 120
  121 QRLSDASDVK CSGSSPLLTC 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.30103
Match: 1txqB
Description: Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle