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View Structure Prediction Details

Protein: GH36_ARATH
Organism: Arabidopsis thaliana
Length: 612 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GH36_ARATH.

Description E-value Query
Range
Subject
Range
gi|17978966 - gi|17978966|gb|AAL47444.1| AT5g54510/F24B18_13 [Arabidopsis thaliana]
1031.0 [0..1] [612..1]

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Predicted Domain #1
Region A:
Residues: [1-612]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEAPKIAAL EVSDESLAEK NKNKLQFIED VTTNADDVQR RVLEEILSRN ADVEYLKRHG  60
   61 LEGRTDRETF KHIMPVVTYE DIQPEINRIA NGDKSQVLCS NPISEFLTSS GTSGGERKLM 120
  121 PTIEEELDRR SLLYSLLMPV MDQFVPGLDK GKGMYFLFIK SESKTPGGLP ARPVLTSYYK 180
  181 SSHFKNRPYD PYTNYTSPNQ TILCSDSYQS MYSQMLCGLC QHKEVLRVGA VFASGFIRAI 240
  241 KFLEKHWPEL ARDIRTGTLS SEITDSSVRE AVGEILKPDP KLADFVESEC RKTSWQGIIT 300
  301 RLWPNTKYVD VIVTGTMSQY IPTLDYYSNG LPLVCTMYAS SECYFGVNLR PLCKPSEVSY 360
  361 TLIPNMAYFE FLPVHRNSGV TSSISLPKAL TEKEQQELVD LVDVKLGQEY ELVVTTYAGL 420
  421 YRYRVGDVLS VAGFKNNAPQ FSFICRKNVV LSIDSDKTDE VELQNAVKNA VTHLVPFDAS 480
  481 LSEYTSYADT SSIPGHYVLF WELCLNGNTP IPPSVFEDCC LTIEESLNSV YRQGRVSDKS 540
  541 IGPLEIKMVE SGTFDKLMDY AISLGASINQ YKTPRCVKFA PIIELLNSRV VDSYFSPKCP 600
  601 KWSPGHKQWG SN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.963
Match: 1amuA
Description: Phenylalanine activating domain of gramicidin synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.927181813624701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle