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View Structure Prediction Details

Protein: gi|15240873, gi|...
Organism: Arabidopsis thaliana
Length: 665 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240873, gi|....

Description E-value Query
Range
Subject
Range
gi|1589714, gi|1... - gi|1589714|prf||2211427A receptor protein kinase, gi|1235680|gb|AAC49208.1| receptor serine/threonin...
480.0 [0..1] [665..1]

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Predicted Domain #1
Region A:
Residues: [1-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGFSLSLM FLLVSHFFVS GVMSRNFTIE NKCDYTVWPG FLTMTTAVSL PTNGFSLKKG  60
   61 ESRVINVPPS WSGRLWGRSF CSTSSTGNFS CATGDCGSGK IECSDSGARP PTTLIDFTLD 120
  121 ATDGQDFYDV SVVDGYNLPL VVVPQRLGSG RTCSNVGCVV NLNKTCPSEL KVMGSSNKEH 180
  181 PIACMNACQK FGLPEFCCYG EYGKPAKCQP TLYSTNFKNE CPLAYSYAYD NENNTFRCSN 240
  241 SPNYVITFCP NDISSMSQPS KETNGGTKQK SSWKLKLIVG VSAALTLMIL IVVVIIVRTK 300
  301 NMRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.30103
Match: 2ahnA
Description: No description for 2ahnA was found.

Predicted Domain #2
Region A:
Residues: [305-665]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEWNDQNVEA VAMLKRYSYT RVKKMTNSFA HVLGKGGFGT VYKGKLADSG RDVAVKILKV  60
   61 SEGNGEEFIN EVASMSRTSH VNIVSLLGFC YEKNKRAIIY EFMPNGSLDK YISANMSTKM 120
  121 EWERLYDVAV GISRGLEYLH NRCVTRIVHF DIKPQNILMD ENLCPKISDF GLAKLCKNKE 180
  181 SIISMLHMRG TFGYIAPEMF SKNFGAVSHK SDVYSYGMVV LEMIGAKNIE KVEYSGSNNG 240
  241 SMYFPEWVYK DFEKGEITRI FGDSITDEEE KIAKKLVLVA LWCIQMNPSD RPPMIKVIEM 300
  301 LEGNLEALQV PPNPLLFSPE ETVPDTLEDS DDTSTFFNPS HFERGTLLDS EDVLQHGSRS 360
  361 S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle