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View Structure Prediction Details

Protein: SRO5_ARATH
Organism: Arabidopsis thaliana
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRO5_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592445 - gi|21592445|gb|AAM64396.1| unknown [Arabidopsis thaliana]
290.0 [0..1] [309..1]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYVRTQVEA VFDDSEQDGS TISESGSCDS SSDRSFADEL GLMELLEGDK AHDLIYRNCK  60
   61 SGLGDQCQIL SVLRNGFRNV GSRAKLKTFQ VFQEAVQMKH GGDGGAKVKY GWCSVSKHEL 120
  121 KTIFEYGFSE PLRNDGSFGR GLYLSPDNSP LDCLKDSASE SEDGMRFLLL CRVLLGKSEI 180
  181 VPQGSTRSCP SSPEFDSGVD DLVSTKKYIV WSTHMNTHVL PEFLVCIKAP FNLTRSPKRL 240
  241 RSPWMAFPVL IKALSKFLPP SQILVIQKHY KDQQNRRITR SELIQRVRSI TGDKLLVHII 300
  301 KACGHKVQH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.154902
Match: 1uk0A
Description: Crystal structure of catalytic domain of human poly(ADP-ribose) polymerase with a novel inhibitor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.35655888612093 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle