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View Structure Prediction Details

Protein: DPE1_ARATH
Organism: Arabidopsis thaliana
Length: 576 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|221564274, gi... - gi|222054985|ref|YP_002537347.1| 4-alpha-glucanotransferase [Geobacter sp. FRC-32], gi|221564274|gb|...
651.0 [0..78] [575..1]

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Predicted Domain #1
Region A:
Residues: [1-576]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILLRPSSS PSLCSSLKLF RLSSPDSLID AAVLRNRTKP SQSFRMEVVS SNSTCLSSIS  60
   61 VGEDFPSEYE QWLPVPDPES RRRAGVLLHP TSFRGPHGIG DLGEEAFRFI DWLHSTGCSV 120
  121 WQVLPLVPPD EGGSPYAGQD ANCGNTLLIS LDELVKDGLL IKDELPQPID ADSVNYQTAN 180
  181 KLKSPLITKA AKRLIDGNGE LKSKLLDFRN DPSISCWLED AAYFAAIDNT LNAYSWFEWP 240
  241 EPLKNRHLSA LEAIYESQKE FIDLFIAKQF LFQRQWQKVR EYARRQGVDI MGDMPIYVGY 300
  301 HSADVWANKK HFLLNKKGFP LLVSGVPPDL FSETGQLWGS PLYDWKAMES DQYSWWVNRI 360
  361 RRAQDLYDEC RIDHFRGFAG FWAVPSEAKV AMVGRWKVGP GKSLFDAISK GVGKIKIIAE 420
  421 DLGVITKDVV ELRKSIGAPG MAVLQFAFGG GADNPHLPHN HEVNQVVYSG THDNDTIRGW 480
  481 WDTLDQEEKS KAMKYLSIAG EDDISWSVIQ AAFSSTAQTA IIPMQDILGL GSSARMNTPA 540
  541 TEVGNWGWRI PSSTSFDNLE TESDRLRDLL SLYGRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 176.0
Match: 1x1nA
Description: No description for 1x1nA was found.

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 3.1190602686215 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.98773241907716 bayes_pls_golite062009
hydrolase activity 2.87134532188836 bayes_pls_golite062009
catalytic activity 2.22613067995402 bayes_pls_golite062009
glycogen debranching enzyme activity 1.61342226744611 bayes_pls_golite062009
1,4-alpha-glucan branching enzyme activity 0.72343541139639 bayes_pls_golite062009
chitinase activity 0.67854733864231 bayes_pls_golite062009
glucosidase activity 0.58717079348538 bayes_pls_golite062009
hexosaminidase activity 0.16438321606077 bayes_pls_golite062009
amylase activity 0.0914002140078796 bayes_pls_golite062009
alpha-amylase activity 0.0521244165288097 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle