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View Structure Prediction Details

Protein: CE40792
Organism: Caenorhabditis elegans
Length: 655 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40792.

Description E-value Query
Range
Subject
Range
CE27332 - WBGene00022205 status:Partially_confirmed TR:Q95XE8 protein_id:AAK39361.1
770.0 [0..126] [655..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFRVRSETD SQPPFACLND IKLFDTDNIG RGINAAILNG TTGDIVEKAT FDVTASDEKL  60
   61 MTWLLKVPQA SLLVAASF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDVAEHVSRQ SRQLADESKL AELGAFEADL LQQNKDVEYG GKWKNCGMDR PCNEADTIPV  60
   61 HFFSGEHKDD HPKMCIGGRM LFD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [162-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDLNSAGRGL NLAMLEPKTG KVTAVAHFDT CEDESHGLEE WLDAVPTGYI VAVVSFDEAS  60
   61 NQLSDMARRI FYEMGSMHKW AGRRDTSSSM TSSASNDVRN LPKRHSCPKY DRHEEFCGAA 120
  121 NLDSPIMPRH 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [292-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSDEQRSSDA IFNVPILVAS GLAPDSLRIT LESLLNQEGL NTQMVLVTYD KEYSENADLA  60
   61 ALFHVKTHLL LSLSNAFSII IIIVQRAQAV GFTDTSGDGQ TVYRIKNHLP IGSYLMKRDL 120
  121 YEKHIRLREF CCTERGNWDL RESISLVPAM SRIETLQLFS NEDREKMRII GVCTQYTAFY 180
  181 DILYLLCFLV FFTDFSRLSR YENQVLLASK QHMCHVWEKV WVFYSRNPSY YIDHFYRYLP 240
  241 TEFTIFSLGK CFSICKKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.39794
Match: 1fo8A
Description: N-acetylglucosaminyltransferase I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

Predicted Domain #5
Region A:
Residues: [550-655]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNYLINTEFE TSEEYLTHLN QLVQNTKKSI PITEIQSIGC EVWADQLDRQ LKSILLTYSG  60
   61 KSEVESIFEC WKMYWTPKIL RSNRVFRFSL HQAIEVITVA DNLKIE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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