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View Structure Prediction Details

Protein: pdi-2
Organism: Caenorhabditis elegans
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pdi-2.

Description E-value Query
Range
Subject
Range
pdi-2 - status:Confirmed UniProt:Q8IG53 protein_id:AAN39682.1
246.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLVGLFFL VLGASAAVIE EEENVIVLTK DNFDEVINGN EFILVEFYAP WCGHCKSLAP  60
   61 EYAKAATQLK EEGSDIKLGK LDATVHGEVS SKFEVRGYPT LKLFRNGKPQ EYNGGRDHDS 120
  121 IIAWLKKKTG PVAKPLADAD AVKELQESAD VVVIGYFKDT TSDDAKTFLE ENARIMEFFG 180
  181 LKKDELPAIR LISLEEDMTK FKPDFEEITT ENISKFTQNY LDGSVKPHLM SEDIPEDWDK 240
  241 NPVKILVGKN FEQVARDNTK NVLVEFYAPW CGHCKQLAPT WDKLGEKFAD DESIVIAKMD 300
  301 STLNEVEDVK IQSFPTIKFF PAGSNKVVDY TGDRTIEGFT KFLETNGKEG AGASEEEKAE 360
  361 EEADEEGHTE L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.30103
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle