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View Structure Prediction Details

Protein: gi|56461742, gi|...
Organism: Arabidopsis thaliana
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56461742, gi|....

Description E-value Query
Range
Subject
Range
gi|7267760, gi|7... - pir||T04198 hypothetical protein T4F9.90 - Arabidopsis thaliana, gi|7267760|emb|CAB78186.1| putativ...
223.0 [0..3] [314..2]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGCVSSNLL TPTDDSSFSH LTSSSLSQHF VKLTSTTYGL LNLDSSSPSP PSPSSSSSAK  60
   61 SVITPMTPPE RFTINGKEAA MMMVKSEPTT EVINFWELMS GLDGDTCRFS PIPVKCNGFS 120
  121 GGLKKENSDP NLKNPNDY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 2diyA
Description: No description for 2diyA was found.

Predicted Domain #2
Region A:
Residues: [139-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVLKPLDPKL AEESERLCDG GENRVVIYTT SLRGVRRTFE ACNAVRAAIE SFGVVVCERD  60
   61 VSMDRGFREE LSNLMAVEST AAVLPPRVFV KGKYIGGAEE VMRLVEEGLL GELLKEIPRK 120
  121 KDRCGGGCGG CGGLAFLPCS GCNGSCKVVE GWGNDAVVVK CKECNENGLV RCPICS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.30103
Match: 1ykaA
Description: Solution structure of Grx4, a monothiol glutaredoxin from E. coli.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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