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View Structure Prediction Details

Protein: Y2992_ARATH
Organism: Arabidopsis thaliana
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y2992_ARATH.

Description E-value Query
Range
Subject
Range
VSPA_SOYBN - Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1
301.0 [0..53] [277..3]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAYTHPMER ELSGLSSRGN SELGSRYSIE SGCYMTSLAA SIFIASLVTF GVLMITLLIA  60
   61 LSTMLQSCEN RNIAIVEAQR LDESFGYCKI LSLHSQLNSL DEES

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELPLLCRDVA LHRIKQGIYL RELNFTIQMA LTYFQTIKPM NDNCDVVVID IDDTNLLEQD  60
   61 SYYMKYIEEA KHQKSILILA LYSKLRSQGY SMVLLSRRPE TERNATIEQL KSRGYSDWSH 120
  121 LIMSREDTRQ KEELERGHRV IGVIGNHMDV LRGQWNWQSK RLFKLPSLTY DDVLDYNER

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.39794
Match: 2i33A
Description: No description for 2i33A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle