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View Structure Prediction Details

Protein: FH5_ARATH
Organism: Arabidopsis thaliana
Length: 900 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FH5_ARATH.

Description E-value Query
Range
Subject
Range
gi|22136490, gi|... - gi|22136490|gb|AAM91323.1| unknown protein [Arabidopsis thaliana], gi|14596027|gb|AAK68741.1| Unknow...
506.0 [0..1] [900..1]
gi|109507224 - gi|109507224|ref|XP_001065947.1| PREDICTED: similar to Protein diaphanous homolog 1 (Diaphanous-rela...
386.0 [0..433] [897..610]
gi|109083788 - gi|109083788|ref|XP_001093489.1| PREDICTED: similar to dishevelled-associated activator of morphogen...
381.0 [0..420] [899..442]
gi|119601155, gi... - gi|45708777|gb|AAH38428.1| DAAM1 protein [Homo sapiens], gi|40675526|gb|AAH64999.1| DAAM1 protein [H...
380.0 [0..420] [899..587]
gi|47124599 - gi|47124599|gb|AAH70412.1| Diap1 protein [Mus musculus]
380.0 [0..433] [897..717]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE  60
   61 TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT NLKQTLLDCI QEKGKLNGHN 120
  121 PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS 180
  181 RSPPPPPAKK NASKNSTSAP VS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAKKKEDHEK TIIIAVVVTA VSTFLLAALF FLCCSRVCGN GSGGRKNDER PLLSLSSSDY  60
   61 SVGSSINYGG SVKGDKQGHQ SFNIYSNQGK MSSFDGSNSD TSDSLEERLS HEGLRNNSIT 120
  121 NHGLPPLKPP PGRTASVLSG KSFSGKVEPL PPEPPKFLKV SSKKASAP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [371-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP  60
   61 ADALDDDAPK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [441-900]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA  60
   61 LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK 120
  121 LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL HEEMAFVKES FQKLEVACKE 180
  181 LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE 240
  241 IIRTEGVRAA RTIRESQSFS SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK 300
  301 SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE 360
  361 EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ 420
  421 GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 2j1dG
Description: No description for 2j1dG was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle