| Protein: | CRD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
704.0 | [0..1] | [409..1] |
|
|
703.0 | [0..1] | [409..1] |
|
|
700.0 | [0..1] | [409..1] |
|
|
693.0 | [0..1] | [409..1] |
|
|
689.0 | [0..1] | [409..20] |
|
|
662.0 | [0..40] | [409..2] |
|
|
662.0 | [0..2] | [409..5] |
|
|
652.0 | [0..2] | [409..4] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE 60
61 IQESLLTPRF YTTDFEEMEQ LFNTEINKN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.466 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.459 | N/A | N/A | a.29.14 | Description not found. |
| View | Download | 0.413 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.392 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.387 | N/A | N/A | a.159.4 | Description not found. |
| View | Download | 0.344 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.323 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.289 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.279 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [90-337] |
1 11 21 31 41 51
| | | | | |
1 LNEAEFEALL QEFKTDYNQT HFVRNKEFKE AADKLQGPLR QIFVEFLERS CTAEFSGFLL 60
61 YKELGRRLKK TNPVVAEIFS LMSRDEARHA GFLNKGLSDF NLALDLGFLT KARKYTFFKP 120
121 KFIFYATYLS EKIGYWRYIT IYRHLKENPE FQCYPIFKYF ENWCQDENRH GDFFSALMKA 180
181 QPQFLNDWQA KLWSRFFCLS VYVTMYLNDC QRTNFYEGIG LNTKEFDMHV IIETNRTTAR 240
241 IFPAVLDV
|
| Detection Method: | |
| Confidence: | 0.967 |
| Match: | 1nnqA |
| Description: | rubrerythrin from Pyrococcus furiosus Pfu-1210814 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [338-409] |
1 11 21 31 41 51
| | | | | |
1 ENPEFKRKLD RMVVSYEKLL AIGETDDASF IKTLKRIPLV TSLASEILAA YLMPPVESGS 60
61 VDFAEFEPNL VY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.853 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.672 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.638 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.598 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.595 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.536 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.502 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.491 | a.28.1 | ACP-like |
| View | Download | 0.484 | a.28.1 | ACP-like |
