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View Structure Prediction Details

Protein: PME62_ARATH
Organism: Arabidopsis thaliana
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME62_ARATH.

Description E-value Query
Range
Subject
Range
PMEU1_SOLLC - Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1
384.0 [0..2] [378..199]

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Predicted Domain #1
Region A:
Residues: [1-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVEAFIPAV LLLCFGVMLC LKSSCALQIG NNNELKNYIS WEDLRVVEDG RIERSFSIKE  60
   61 NSNWVTTNAN ANANATNVRR VIVVDKNGGG DSVTVQGAVD MVPDSNSQRV KIFILPGIYR 120
  121 EKVIVPKSKP YISFIGNESY AGDTVISWSD KASDLGCDGK ELGTYRTASV SIESDFFCAT 180
  181 AITFENTVVA EAGEQGRQAV ALRIIGDKAV FYRVRVLGSQ DTLFDDNGSH YFYQCYIQGN 240
  241 VDFIFGNAKS LYQDCDIHST AKRYGAIAAH HRDSETEDTG FSFVNCDISG TGQIYLGRAW 300
  301 GNYSRTVYSN CFIADIITPV GWSDWKHPER QRKVMFGEYN CRGRGAERGG RVPWSKTLTR 360
  361 DEVKPFLGRE FIYGDQWLRL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.522879
Match: 1xg2A
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle