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View Structure Prediction Details

Protein: DTX28_ARATH
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX28_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
324.0 [0..7] [487..622]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGERDDEAEG ILEKAKIPLL KDQNVAEEEN GEIKKEIWLE TKKLWRIVGP AIFTRVTTNL  60
   61 IFVITQAFAG HLGELELAAI SIVNNVIIGF NYSLFIGMAT ALETLCGQAF GAKKYDMFGV 120
  121 YLQRSWIVLF LFSILLLPMY IFATPILKFM GQPDDIAELS GIISVWAIPT HFSFAFFFPI 180
  181 NRFLQCQLKN SVIAISSGVS LVVHIFVCWL FVYVLELGVI GTIATANVSW WLNVFILFTY 240
  241 TTCGGCPLTW TGFSM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 39.721246
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [256-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESFTRLWEFT KLSASSGIMV CLENWYYRML IVMTGNLEDA RIDVDSMSIC MSINGLEMMV  60
   61 PLAFFAGTSV RVANELGAGN GKRARFAMII SVTQSLIIGI IISVLIYFLL DQIGWMFSSS 120
  121 ETVLKAVNNL SILLSFAILL NSVQPVLSGV AVGSGWQSLV AFINLGCYYF IGLPLGIVMG 180
  181 WMFKFGVKGI WAGMIFGGTM VQTLILIFIT MRCDWEKEAQ NAKVRVNKWS VSDARK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.022276
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle