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View Structure Prediction Details

Protein: RK31_ARATH
Organism: Arabidopsis thaliana
Length: 144 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RK31_ARATH.

Description E-value Query
Range
Subject
Range
gi|148550162, gi... - gi|82736115|ref|ZP_00898975.1| Ribosomal protein L31 [Pseudomonas putida F1], gi|82716758|gb|EAP5181...
gi|24986872, gi|... - gi|26991763|ref|NP_747188.1| ribosomal protein L31 [Pseudomonas putida KT2440], gi|24986872|gb|AAN70...
144.0 [0..25] [120..6]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSLPNSFL QISPCVPSLQ LRKPVMAAVK GGKQSVRRSS NTVVQITCRK KELHPEFHED  60
   61 AKVYCNGELV MTTGGTKKEY VVDVWSGNHP FYLGNRSALM VDADQVEKFR KRFAGLSEIM 120
  121 EIPVLKGEII MPTKKSKGPK GKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 2hgj3
Description: No description for 2hgj3 was found.

Predicted functions:

Term Confidence Notes
structural molecule activity 0.59387205224211 bayes_pls_golite062009
structural constituent of ribosome 0.58294706356903 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle