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View Structure Prediction Details

Protein: SBT15_ARATH
Organism: Arabidopsis thaliana
Length: 775 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT15_ARATH.

Description E-value Query
Range
Subject
Range
gi|13430434 - gi|13430434|gb|AAK25839.1|AF360129_1 putative subtilisin serine protease [Arabidopsis thaliana]
558.0 [0..1] [775..1]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFFFYFFFL LTLSSPSSSA SSSNSLTYIV HVDHEAKPSI FPTHFHWYTS SLASLTSSPP  60
   61 SIIHTYDTVF HGFSARLTSQ DASQLLDHPH VISVIPEQVR HLHTTRSP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 1r6vA
Description: Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [109-775]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFLGLRSTDK AGLLEESDFG SDLVIGVIDT GVWPERPSFD DRGLGPVPIK WKGQCIASQD  60
   61 FPESACNRKL VGARFFCGGY EATNGKMNET TEFRSPRDSD GHGTHTASIS AGRYVFPAST 120
  121 LGYAHGVAAG MAPKARLAAY KVCWNSGCYD SDILAAFDTA VADGVDVISL SVGGVVVPYY 180
  181 LDAIAIGAFG AIDRGIFVSA SAGNGGPGAL TVTNVAPWMT TVGAGTIDRD FPANVKLGNG 240
  241 KMISGVSVYG GPGLDPGRMY PLVYGGSLLG GDGYSSSLCL EGSLDPNLVK GKIVLCDRGI 300
  301 NSRATKGEIV RKNGGLGMII ANGVFDGEGL VADCHVLPAT SVGASGGDEI RRYISESSKS 360
  361 RSSKHPTATI VFKGTRLGIR PAPVVASFSA RGPNPETPEI LKPDVIAPGL NILAAWPDRI 420
  421 GPSGVTSDNR RTEFNILSGT SMACPHVSGL AALLKAAHPD WSPAAIRSAL ITTAYTVDNS 480
  481 GEPMMDESTG NTSSVMDYGS GHVHPTKAMD PGLVYDITSY DYINFLCNSN YTRTNIVTIT 540
  541 RRQADCDGAR RAGHVGNLNY PSFSVVFQQY GESKMSTHFI RTVTNVGDSD SVYEIKIRPP 600
  601 RGTTVTVEPE KLSFRRVGQK LSFVVRVKTT EVKLSPGATN VETGHIVWSD GKRNVTSPLV 660
  661 VTLQQPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.221849
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle