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View Structure Prediction Details

Protein: gi|6910576, gi|1...
Organism: Arabidopsis thaliana
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6910576, gi|1....

Description E-value Query
Range
Subject
Range
COMT1_POPTM - Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1
304.0 [0..1] [350..14]

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Predicted Domain #1
Region A:
Residues: [1-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS  60
   61 SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF TKNQNGGGSL APMVNLFQDK 120
  121 VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN 180
  181 YNGFDGVKSL VDVGGGDGSL LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF 240
  241 TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL 300
  301 FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK

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Detection Method: PSI-BLAST
Confidence: 78.30103
Match: 1kywA
Description: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.25333584501255 bayes_pls_golite062009
transcription factor activity 1.15674263968928 bayes_pls_golite062009
transferase activity 1.07321114919891 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.612108481676679 bayes_pls_golite062009
methyltransferase activity 0.606225212585352 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.14147363365106 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle