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View Structure Prediction Details

Protein: gi|7268286, gi|1...
Organism: Arabidopsis thaliana
Length: 446 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7268286, gi|1....

Description E-value Query
Range
Subject
Range
gi|110740348 - gi|110740348|dbj|BAF02069.1| HSR201 like protein [Arabidopsis thaliana]
302.0 [0..1] [446..13]

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Predicted Domain #1
Region A:
Residues: [1-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METMTMKVET ISKEIIKPSS PTPNNLQTLQ LSIYDHILPP VYTVAFLFYT KNDLISQEHT  60
   61 SHKLKTSLSE TLTKFYPLAG RITGVTVDCT DEGAIFVDAR VNNCPLTEFL KCPDFDALQQ 120
  121 LLPLDVVDNP YVAAATWPLL LVKATYFGCG GMAIGICITH KIADAASIST FIRSWAATAR 180
  181 GENDAAAMES PVFAGANFYP PANEAFKLPA DEQAGKRSSI TKRFVFEASK VEDLRTKAAS 240
  241 EETVDQPTRV ESVTALIWKC FVASSKTTTC DHKVLVQLAN LRSKIPSLLQ ESSIGNLMFS 300
  301 SVVLSIGRGG EVKIEEAVRD LRKKKEELGT VILDEGGSSD SSSMIGSKLA NLMLTNYSRL 360
  361 SYETHEPYTV SSWCKLPLYE ASFGWDSPVW VVGNVSPVLG NLAMLIDSKD GQGIEAFVTL 420
  421 PEENMSSFEQ NPELLAFATM NPSVLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.522879
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle