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View Structure Prediction Details

Protein: BCA3_ARATH
Organism: Arabidopsis thaliana
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCA3_ARATH.

Description E-value Query
Range
Subject
Range
gi|15810273, gi|... - gi|6016709|gb|AAF01535.1|AC009325_5 carbonic anhydrase, chloroplast precursor [Arabidopsis thaliana]...
313.0 [0..1] [257..78]

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Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTESYEDAI KRLGELLSKK SDLGNVAAAK IKKLTDELEE LDSNKLDAVE RIKSGFLHFK  60
   61 TNNYEKNPTL YNSLAKSQTP KFLVFACADS RVSPSHILNF QLGEAFIVRN IANMVPPYDK 120
  121 TKHSNVGAAL EYPITVLNVE NILVIGHSCC GGIKGLMAIE DNTAPTKTEF IENWIQICAP 180
  181 AKNRIKQDCK DLSFEDQCTN CEKEAVNVSL GNLLSYPFVR ERVVKNKLAI RGAHYDFVKG 240
  241 TFDLWELDFK TTPAFALS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.221849
Match: 1ekjA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.96380803089124 bayes_pls_golite062009
catalytic activity 1.85658156053797 bayes_pls_golite062009
carbon-oxygen lyase activity 1.691366175135 bayes_pls_golite062009
hydro-lyase activity 1.65497918079842 bayes_pls_golite062009
lyase activity 1.62374861994341 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle