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View Structure Prediction Details

Protein: GCA1_ARATH
Organism: Arabidopsis thaliana
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537242 - gi|21537242|gb|AAM61583.1| unknown [Arabidopsis thaliana]
286.0 [0..1] [275..1]

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Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF  60
   61 VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI QDNSLVHVAK SNLSGKVHPT 120
  121 IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV 180
  181 WGGNPARFLR KLTDEEIAFI SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE 240
  241 EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 1xhdA
Description: X-ray crystal structure of putative acetyltransferase, product of BC4754 gene [Bacillus cereus]
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle