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View Structure Prediction Details

Protein: gi|124301144, gi...
Organism: Arabidopsis thaliana
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124301144, gi....

Description E-value Query
Range
Subject
Range
gi|31322582 - gi|31322582|gb|AAP35056.1| NAC-domain protein 485 [Brassica napus]
233.0 [0..4] [210..10]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPTYRALPV GMRFRPSDLE LAVYFLIKKA LGLPMKALTV PDECNDIFST HPRDLPGYGS  60
   61 EEHWYFYCKK PKNQVTRTKS YNLWIPTGEK TDVLDPKKNG GELVGIKHSF TFIENEEEEE 120
  121 SDNKNGDEEE PPQCNWFLDE ISLPLTVVDT DWTLCHIFYE KVKPEFGNLH IVESESESEE 180
  181 EEEDESVDKP AESLDSVKEK DGTVLPPPPA TP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.522879
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle