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View Structure Prediction Details

Protein: gi|11079523, gi|...
Organism: Arabidopsis thaliana
Length: 574 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11079523, gi|....

Description E-value Query
Range
Subject
Range
gi|12321347 - gi|12321347|gb|AAG50743.1|AC079733_11 hypothetical protein [Arabidopsis thaliana]
322.0 [0..1] [574..1]

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Predicted Domain #1
Region A:
Residues: [1-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS  60
   61 GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK FDSGPSLFSG LQSRGPQANP 120
  121 LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA 180
  181 ILPLSSAAMA LPPLSIRGDL GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV 240
  241 DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE 300
  301 ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP 360
  361 PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH HIVVNDWDRG VDADQNVVLI 420
  421 SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL 480
  481 GLGFKREKCE VSLVGTPLTH QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF 540
  541 PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.30103
Match: 2iw5A
Description: No description for 2iw5A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.03768022092949 bayes_pls_golite062009
oxidoreductase activity 0.78682363509228 bayes_pls_golite062009
transcription regulator activity 0.0696342306231097 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle