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View Structure Prediction Details

Protein: ALG3_ARATH
Organism: Arabidopsis thaliana
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG3_ARATH.

Description E-value Query
Range
Subject
Range
gi|30725280, gi|... - gi|30725280|gb|AAP37662.1| At2g47760/F17A22.15 [Arabidopsis thaliana], gi|16226531|gb|AAL16193.1|AF4...
567.0 [0..1] [438..1]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGASSPASL RASRSRRLGK ETNRSDLFKK PAVPFAFALI LADAILVALI IAYVPYTKID  60
   61 WDAYMSQVSG FLGGERDYGN LKGDTGPLVY PAGFLYVYSA VQNLTGGEVY PAQILFGVLY 120
  121 IVNLGIVLII YVKTDVVPWW ALSLLCLSKR IHSIFVLRLF NDCFAMTLLH ASMALFLYRK 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WHLGMLVFSG AVSVKMNVLL YAPTLLLLLL KAMNIIGVVS ALAGAALVQI LVGLPFLITY  60
   61 PVSYIANAFD LGRVFIHFWS VNFKFVPERV FVSKEFAVCL LIAHLFLLVA FANYKWCKHE 120
  121 GGIIGFMRSR HFFLTLPSSL SFSDVSASRI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [331-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITKEHVVTAM FVGNFIGIVF ARSLHYQFYS WYFYSLPYLL WRTPFPTWLR LIMFLGIELC  60
   61 WNVYPSTPSS SGLLLCLHLI ILVGLWLAPS VDPYQLKEHP KSQIHKKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle