YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: P2C36_ARATH
Organism: Arabidopsis thaliana
Length: 650 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C36_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537109 - gi|21537109|gb|AAM61450.1| unknown [Arabidopsis thaliana]
405.0 [0..1] [650..1]

Back

Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNGVASFSG CCAGTTAGEI SGRYVTGVGL VQENLGHSFC YVRPVLTGSK SSFPPEPPLR  60
   61 PDPIPGTTTT FRSISGASVS ANTSTALSTS LSTDTSGIAS AFESSNRFAS LPLQPVPRSP 120
  121 IKKSDHGSGL FERRFLSGPI ESGLVSGKKT KEKAKLKKSG SKSFTKPKLK KSESKIFTFK 180
  181 NVFTNLSCSK K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [192-650]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVIKPINGFD SFDGSSDTDR YIPEINSLST IVSSHEKPRI KEEEDKTESA LEEPKIQWAQ  60
   61 GKAGEDRVHV ILSEENGWLF VGIYDGFSGP DPPDYLIKNL YTAVLRELKG LLWIDKGESY 120
  121 NRNGESNIEK QSTVEHASDS DQENCPVMNG NDVACGSRNI TSDVKKLQWR CEWEHNSSNK 180
  181 SNNINHKDVL RALQQALEKT EESFDLMVNE NPELALMGSC VLVTLMKGED VYVMSVGDSR 240
  241 AVLARRPNVE KMKMQKELER VKEESPLETL FITERGLSLL VPVQLNKEHS TSVEEEVRRI 300
  301 KKEHPDDILA IENNRVKGYL KVTRAFGAGF LKQPKWNEAL LEMFRIDYVG TSPYITCSPS 360
  361 LHHHRLSSRD KFLILSSDGL YEYFSNEEAI FEVDSFISAF PEGDPAQHLI QEVLLRAAKK 420
  421 YGMDFHELLE IPQGDRRRYH DDVSVIVISL EGRIWRSSM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 2pnqA
Description: No description for 2pnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle