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View Structure Prediction Details

Protein: gi|62320502, gi|...
Organism: Arabidopsis thaliana
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62320502, gi|....

Description E-value Query
Range
Subject
Range
VSPA_SOYBN - Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1
314.0 [0..1] [256..3]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIYLIFLVV VSLFTSAFSD SILEYPSEIE SRHKKAAEED VNLHCTTWRF AAEMNNLAPW  60
   61 KTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 1ly1A
Description: Polynucleotide kinase, kinase domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [64-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVECADYVKD YVMGKGYLTD LERVSEEALI FARSIEFSGD GKDIWIFDID ETLLSNLPYY  60
   61 IDHGFGLELF DHSEFDKWVE RGVAPAIAPS LKLYQRVLDL GYKVFLLTGR KESHRLVTVE 120
  121 NLINAGFQNW DKLILRSPEE QHKMATLYKS EKRDEMVKEG YRIRGNSGDQ WSDLLGTSMS 180
  181 QRSFKLANPM YYIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.39794
Match: 2i33A
Description: No description for 2i33A was found.

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