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View Structure Prediction Details

Protein: DOX1_ARATH
Organism: Arabidopsis thaliana
Length: 639 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOX1_ARATH.

Description E-value Query
Range
Subject
Range
gi|12539609 - gi|12539609|gb|AAG59584.1|AF229926_1 pathogen-inducible alpha-dioxygenase [Nicotiana attenuata]
631.0 [0..1] [638..5]

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Predicted Domain #1
Region A:
Residues: [1-639]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVITSLISS ILLKFIHKDF HEIYARMSLL DRFLLLIVHG VDKMVPWHKL PVFLGLTYLE  60
   61 VRRHLHQQYN LLNVGQTPTG IRFDPANYPY RTADGKFNDP FNEGVGSQNS FFGRNCPPVD 120
  121 QKSKLRRPDP MVVATKLLGR KKFIDTGKQF NMIAASWIQF MIHDWIDHLE DTHQIELVAP 180
  181 KEVASKCPLS SFRFLKTKEV PTGFFEIKTG SQNIRTPWWD SSVIYGSNSK TLDRVRTYKD 240
  241 GKLKISEETG LLLHDEDGLA ISGDIRNSWA GVSALQALFI KEHNAVCDAL KDEDDDLEDE 300
  301 DLYRYARLVT SAVVAKIHTI DWTVQLLKTD TLLAGMRANW YGLLGKKFKD SFGHAGSSIL 360
  361 GGVVGMKKPQ NHGVPYSLTE DFTSVYRMHS LLPDQLHILD IDDVPGTNKS LPLIQEISMR 420
  421 DLIGRKGEET MSHIGFTKLM VSMGHQASGA LELMNYPMWL RDIVPHDPNG QARPDHVDLA 480
  481 ALEIYRDRER SVPRYNEFRR SMFMIPITKW EDLTEDEEAI EVLDDVYDGD VEELDLLVGL 540
  541 MAEKKIKGFA ISETAFYIFL IMATRRLEAD RFFTSDFNET IYTKKGLEWV NTTESLKDVI 600
  601 DRHYPDMTDK WMNSESAFSV WDSPPLTKNP IPLYLRIPS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 140.0
Match: 1pxxA
Description: CRYSTAL STRUCTURE OF DICLOFENAC BOUND TO THE CYCLOOXYGENASE ACTIVE SITE OF COX-2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle