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View Structure Prediction Details

Protein: gi|8920573, gi|1...
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8920573, gi|1....

Description E-value Query
Range
Subject
Range
gi|25407778, gi|... - gi|7270644|emb|CAB80361.1| MAP3K-like protein kinase [Arabidopsis thaliana], gi|4006878|emb|CAB16796...
274.0 [0..29] [346..336]
gi|113622742, gi... - gi|51963696|ref|XP_506619.1| PREDICTED P0015C07.31 gene product [Oryza sativa (japonica cultivar-gro...
265.0 [0..25] [346..16]
gi|92897147 - gi|92897147|gb|ABE93551.1| Phosphatidylinositol-specific phospholipase C, X region [Medicago truncat...
258.0 [0..15] [346..5]
gi|116309308 - gi|116309308|emb|CAH66396.1| B0222C05.4 [Oryza sativa (indica cultivar-group)]
258.0 [0..28] [346..30]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFKFFFAA IILVLFHPAA ITFVASYGSL QLGDQCSSDE DCNVGLGCFK CGIDVARCVR  60
   61 SNITDQFSIV NNSMPFNKYA FLTTHNSYAI EGKALHVATQ EDTIVQQLNS GVRALMLDTY 120
  121 DYEGDVWFCH SFDEQCFEFT KFNRAIDTFK EIFAFLTANP SEIVTLILED YVKSQNGLTK 180
  181 VFTDSGLKKF WFPVQNMPIG GQDWPLVKDM VANNHRLIVF TSAKSKQETE GIAYQWNYMV 240
  241 ENQYGDDGVK PDECSNRADS ALLTDKTKAL VSVNHFKTVP VKILTCEENS EQLLDMIKTC 300
  301 YVAAGNRWAN FVAVNFYKRS NGGGTFQAID KLNGELLCGR DDVHAC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 1djgA
Description: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle