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View Structure Prediction Details

Protein: LONM3_ARATH
Organism: Arabidopsis thaliana
Length: 924 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for LONM3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-685]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPKRFNTSG FDTTLRLPSY YGFLHLTQSL TLNSRVFYGA RHVTPPAIRI GSNPVQSLLL  60
   61 FRAPTQLTGW NRSSRDLLGR RVSFSDRSDG VDLLSSSPIL STNPNLDDSL TVIALPLPHK 120
  121 PLIPGFYMPI HVKDPKVLAA LQESTRQQSP YVGAFLLKDC ASTDSSSRSE TEDNVVEKFK 180
  181 VKGKPKKKRR KELLNRIHQV GTLAQISSIQ GEQVILVGRR RLIIEEMVSE DPLTVRVDHL 240
  241 KDKPYDKDNA VIKASYVEVI STLREVLKTN SLWRDQDIGD FSYQHLADFG AGISGANKHK 300
  301 NQGVLTELDV HKRLELTLEL VKKQVEINKI KETDDGSSLS AKIRVRIDTK RDKIPKHVIK 360
  361 VMEEEFTKLE MLEENYSDFD LTYNYLHWLT VLPWGNFSYE NFDVLRAKKI LDEDHYGLSD 420
  421 VKERILEFIA VGRLRGTSQG KIICLSGPPG VGKTSIGRSI ARALDRKFFR FSVGGLSDVA 480
  481 EIKGHCQTYV GAMPGKMVQC LKSVGTANPL ILFDEIDKLG RCHTGDPASA LLEVMDPEQN 540
  541 AKFLDHFLNV TIDLSKVLFV CTANVIEMIP GPLLDRMEVI DLSGYVTDEK MHIARDYLVK 600
  601 KTCRDCGIKP EHVDLSDAAL LSLIENYCRE AGVRNLQKQI EKIYRKVALE LVRQGAVSFD 660
  661 VTDTKDTKSL AKTDSEVKRM KVADI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 1qvrA
Description: Crystal Structure Analysis of ClpB
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [686-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILESATGD STESKTKQSG LVAKTFEKVM IDESNLADYV GKPVFQEEKI YEQTP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 2ce7A
Description: EDTA treated
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [741-924]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGVVMGLAWT SMGGSTLYIE TTFVEEGLGK GGLHITGQLG DVMKESAQIA HTVARRIMFE  60
   61 KEPENLFFAN SKLHLHVPEG ATPKDGPSAG CTMITSFLSL AMKKLVRKDL AMTGEVTLTG 120
  121 RILPIGGVKE KTIAARRSQI KTIIFPEANR RDFEELAENM KEGLDVHFVD EYEKIFDLAF 180
  181 NYDH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.221849
Match: 1rr9A
Description: Catalytic domain of E.coli Lon protease
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle