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View Structure Prediction Details

Protein: gi|14517412, gi|...
Organism: Arabidopsis thaliana
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14517412, gi|....

Description E-value Query
Range
Subject
Range
gi|114680995 - gi|114680995|ref|XP_514472.2| PREDICTED: nucleolar protein 5A [Pan troglodytes]
557.0 [0..3] [504..189]

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Predicted Domain #1
Region A:
Residues: [1-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMYVIYESS SGYGLFEVHG LDEIGQNTEA VRTSVSDLSR FGRVVQLTAF HPFESALDAL  60
   61 NQVNAVSEGV MTDELRSFLE LNLPKVKEGK KPKFSLGLAE PKLGSHIFEA TKIPCQSNEF 120
  121 VLELLRGVRQ HFDRFIKDLK PGDLEKSQLG LAHSYSRAKV KFNVNRVDNM VIQAIFMLDT 180
  181 LDKDINSFAM RVREWYSWHF PELVKIVNDN YLYARVSKMI DDKSKLTEDH IPMLTEVLGD 240
  241 EDKAKEVIEA GKASMGSDLS PLDLINVQTF AQKVMDLADY RKKLYDYLVT KMSDIAPNLA 300
  301 ALIGEMVGAR LISHAGSLTN LAKCPSSTLQ ILGAEKALFR ALKTRGNTPK YGLIFHSSFI 360
  361 GRASAKNKGR IARYLANKCS IASRIDCFAD GATTAFGEKL REQVEERLEF YDKGV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.09691
Match: 2nnwA
Description: No description for 2nnwA was found.

Predicted Domain #2
Region A:
Residues: [416-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APRKNVDVMK EVIENLKQEE EGKEPVDASV KKSKKKKAKG EEEEEVVAME EDKSEKKKKK  60
   61 EKRKMETAEE NEKSEKKKTK KSKAGGEEET DDGHSTKKKK KKSKSAE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle