YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: AROD2_ARATH
Organism: Arabidopsis thaliana
Length: 381 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AROD2_ARATH.

Description E-value Query
Range
Subject
Range
PHEA_ENTAG - P-protein OS=Enterobacter agglomerans GN=pheA PE=3 SV=1
419.0 [0..1] [380..1]

Back

Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMHTVRLSP ATQLHGGISS NLSPPNRKPN NSIVRYGCGS SKRFRIVTVL ASLRENDANG  60
   61 RDNSVRAMEV KKIFEDSPLL PKPLSSNQLT ESVSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1ecmA
Description: Chorismate mutase domain of P-protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chorismate mutase activity 3.78733095924257 bayes_pls_golite062009
catalytic activity 1.09506175640279 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [96-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSRVRVAYQG VRGAYSESAA EKAYPNCEAV PCEEFDTAFE AVERWLVDRA VLPIENSLGG  60
   61 SIHRNYDLLL RHNLHIVGEV KLAVRHCLLA NHGVNIEDLR RVLSHPQALA QCENTLTKLG 120
  121 LVREAVDDTA GAAKQIAFEN LNDAAAVASE KAAKIYGLNI VAKDIQDDCD NVTRFLMLAR 180
  181 EPIIPGTNRL FKTSIVFSLE EGPGVLFKAL AVFALRQINL TKIESRPLRK HPLRASGGLK 240
  241 YFDYLFYVDF EASMADEVAQ NALRHLEEFA TFLRVLGSYP VDTTML

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.39794
Match: 2qmxA
Description: No description for 2qmxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle