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View Structure Prediction Details

Protein: gi|9279726, gi|2...
Organism: Arabidopsis thaliana
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9279726, gi|2....

Description E-value Query
Range
Subject
Range
gi|76796738, gi|... - gi|76796738|ref|ZP_00779092.1| Hemolysin A [Thermoanaerobacter ethanolicus ATCC 33223], gi|76587877|...
gi|241902794, gi... - gi|241902794|ref|ZP_04787525.1| hemolysin A [Thermoanaerobacter brockii subsp. finnii Ako-1], gi|241...
256.0 [0..53] [295..4]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFHVLRPPI ALRSSLLGFL SKSHNPLLPG RWVQAGECST MRCFASATRG KNKKQRLDEA  60
   61 CVERFNEYSR TLIQSWIMQG KVLVDGRRVI KAGMPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 1i94D
Description: Ribosomal protein S4
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [97-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STTAAIKITA EVPKFVCRGG LKLEAALEKL DVDVSEKVVL DAGLSTGGFT DCLLRYGAAH  60
   61 VYGVDVGYGQ VADKIRNDKK VTVIERTNLR YLPGLPQKVD VVTLDLSFIS ILKVMPAIMN 120
  121 VMKEDATLVT LVKPQFEARR QQVGKGGIVR DPEVHQEVLE KIINGVERYG FTNKGFIESP 180
  181 IKGADGNIEF LACFNRGTVK PEAEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1or8A
Description: Structure of the Predominant protein arginine methyltransferase PRMT1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.857347609112816 bayes_pls_golite062009
transferase activity 0.769739415230943 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.648175251543522 bayes_pls_golite062009
methyltransferase activity 0.646052703874729 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.00827854656426392 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle