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View Structure Prediction Details

Protein: ADR2_ARATH
Organism: Arabidopsis thaliana
Length: 1007 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ADR2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSPRN WRYNVFTSFH GPDVRIKFLS HLRQQFVYNG ITMFDDNGIE RSQIIAPALK  60
   61 KAIGESRVAI VLLSKNYASS SWCLDELLEI LKCKEYIGQI VMTVFYEVDP SHVRKQTGDF 120
  121 GIAFKETCAH KTEEERSKWS QALTYVGNIA 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.721246
Match: PF01582.12
Description: No description for PF01582.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEDFIHWKDE AKMIEKIARD VSTKINVTPC RDFDDMVGLE RHLKEMVSLL DLDKEGVKMV  60
   61 GISGPAGIGK STIAKALHSR HSSTFQHNCF VDNLWENYKI CTGEHGVKLR LHEQFVSKIL 120
  121 KQNGLELTHL SVIKDRLQDK KVLIILDDVE SLAQLETLAD MTWFGPGSRV IVTTENKEIL 180
  181 QQHGIGDIYQ VGYPSESEAL TIFCLSAFKQ ASPPDGFMDL ADEVVRICDK LPLALCVLGS 240
  241 SLLRKSQTDW EDELPRLRNC LDGIESVLKV GFESLNEKDQ ALFLYITVFF NYECADHVTL 300
  301 MLAKSNLNVR LGLKNLANRY LIHIDHDQKK RVVVHRLLRV MAIQVCTKQK PW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.522879
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [503-1007]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSQILVDAEK IAYVLEEATG NRSIKGVSFD TAEIDELMIS PKAFEKMCNL LFLKVYDAGW  60
   61 HTGKRKLDIP EDIKFPRTIR LFHWDAYSGK RLPSSFFAEN LVEVNMQDSE LQKLWEGTQC 120
  121 LANLKKIDLS RSSCLTELPD LSNATNLEDL YVGSCTALVE LPSSIGNLHK LAHIMMYSCE 180
  181 SLEVIPSLIN LTSLTFLNMN KCSRLRRFPD IPTSIEDVQV TGTTLEELPA SLTHCSGLQT 240
  241 IKISGSVNLK IFYTELPVSV SHINISNSGI EWITEDCIKG LHNLHDLCLS GCKRLVSLPE 300
  301 LPRSLKILQA DDCDSLESLN GHLNTPNAEL YFANCFKLDA EARRAIIQQS FVSGWALLPG 360
  361 LEVPPEFGHR ARGNSLIIPY SASNRFKVCV VMSLNHHQPF ELVPRNLLYR WTVIGDSVSS 420
  421 DEKTFHLSHM FNADSVNSKL QKPHLFIFHS CLPFIFHSCL PFIFDISNIM LEFSSEYKDF 480
  481 DILECGVQIL TDETDERNIW GSLVF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.30103
Match: 2a0zA
Description: The molecular structure of toll-like receptor 3 ligand binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle