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View Structure Prediction Details

Protein: MRS2A_ARATH
Organism: Arabidopsis thaliana
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRS2A_ARATH.

Description E-value Query
Range
Subject
Range
gi|25360983, gi|... - gi|25360983|gb|AAN73219.1| MRS2-10 [Arabidopsis thaliana], gi|21553824|gb|AAM62917.1| unknown [Arabi...
335.0 [0..1] [443..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELKERLLP PRPASAINLR GDAGSRPSPS GRQPLLGVDV LGLKKRGQGL KSWIRVDTSA  60
   61 NSQVIEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE KAIVVNLEQI RCIITADEVL 120
  121 LLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLDNYVLRYV VELQQRLKAS SVTEVWNQDS LELSRRRSRS LDNVLQNSSP DYLPFEFRAL  60
   61 EVALEAACTF LDSQASELEI EAYPLLDELT SKISTLNLER ARRLKSRLVA LTRRVQKVRD 120
  121 EIEQLMDDDG DMAEMYLTEK KKRMEGSLYG DQSLPVYRTN DCFSLSAPVS PVSSPPESRR 180
  181 LEKSLSIVRS RHDSARSSED ATENIEELEM LLEAYFVVID STLNKLTSLK EYIDDTEDFI 240
  241 NIQLDNVRNQ LIQFELLLTT ATFVVAIFGV VAGIFGMNFE IDFFEKPGAF KWVLAITGVC 300
  301 GLVVFLAFLW YYKRRRLMPL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.30103
Match: 2bbjA
Description: Crystal structure of the CorA Mg2+ transporter
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle